services:cluster:start
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| services:cluster:start [2020/06/24 13:14] – remove sheldon and yoshi behrmj87 | services:cluster:start [2024/04/26 14:33] (current) – hoffmac00 | ||
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| ====== Information about the HPC-Cluster ====== | ====== Information about the HPC-Cluster ====== | ||
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| + | <note tip>If you have questions, you can find us on [[https:// | ||
| ===== Access to the Cluster ===== | ===== Access to the Cluster ===== | ||
| - | In order to get access to the department of physics HPC resources you need to send an email to hpc@physik.fu-berlin.de. Please supply the following information: | + | In order to get access to the department of physics HPC resources you need to send an email to [[hpc@physik.fu-berlin.de]]. Please supply the following information: |
| - Your ZEDAT account username | - Your ZEDAT account username | ||
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| - The software you are using for your simulations (e.g. gromacs, gaussian, self-written code in language XYZ, ...) and whether you use MPI or OpenCL/ | - The software you are using for your simulations (e.g. gromacs, gaussian, self-written code in language XYZ, ...) and whether you use MPI or OpenCL/ | ||
| - Software that you happen to know so well that other HPC users within the department may ask you for help. | - Software that you happen to know so well that other HPC users within the department may ask you for help. | ||
| - | - A self-contained example job that is typical for the workload you will be using the HPC systems for, ideally with a small README describing how to run it and a job script. If possible scale it so it runs between a few minutes and an hour at maximum. | + | - A self-contained example job that is typical for the workload you will be using the HPC systems for, ideally |
| - If you are no longer a member of the physics department, we would like to get an estimate on how much longer you will need access to the systems (e.g. to finish some paper) | - If you are no longer a member of the physics department, we would like to get an estimate on how much longer you will need access to the systems (e.g. to finish some paper) | ||
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| * Robert Hübener from AG-Eisert has written a HOWTO for using [[mmacluster|Mathematica on a HPC-Cluster]]. | * Robert Hübener from AG-Eisert has written a HOWTO for using [[mmacluster|Mathematica on a HPC-Cluster]]. | ||
| * A more current Python version has been built for cluster usage. The [[pythoncluster|Python on the HPC-Cluster]] tutorial describes how to set it up. | * A more current Python version has been built for cluster usage. The [[pythoncluster|Python on the HPC-Cluster]] tutorial describes how to set it up. | ||
| - | * Try to [[usetmpforio|use /tmp for I/O intensive single node jobs]] | ||
| ===== Overview of available resources ===== | ===== Overview of available resources ===== | ||
| - | The following table lists some HPC resources available at the physics department. At the end of the table we also list the resources for the ZEDAT [[http:// | + | The following table lists some HPC resources available at the physics department. The tron cluster at Takustrasse 9 is currently restructured. We also have some [[nodes|special purpose nodes]] that are currently not managed by Slurm. |
| The name of the login node for each of our clusters has the same name as the cluster, e.g. the tron login node is reachable via ssh under the hostname '' | The name of the login node for each of our clusters has the same name as the cluster, e.g. the tron login node is reachable via ssh under the hostname '' | ||
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| (06.11.2018) | (06.11.2018) | ||
services/cluster/start.1593004442.txt.gz · Last modified: 2020/06/24 13:14 by behrmj87